Publications

Ménová, P.; Cahová, H.; Plucnara, M.; Havran, L.; Fojta, M.; Hocek, M. Polymerase synthesis of oligonucleotides containing a single chemically modified nucleobase for site-specific redox labelling. Chemical Communications 2013, 49 (41), 4652 DOI: 10.1039/c3cc41438h.

Ménová, P.; Raindlová, V.; Hocek, M. Scope and Limitations of the Nicking Enzyme Amplification Reaction for the Synthesis of Base-Modified Oligonucleotides and Primers for PCR. Bioconjugate Chemistry 2013, 24 (6), 1081-1093 DOI: 10.1021/bc400149q.

Navrátilová, K.; Řezanka, P.; Řezanka, M.; Sýkora, D.; Jindřich, J.; Král, V. The study of enantioselectivity of all regioisomers of mono-carboxymethyl-β-cyclodextrin used as chiral selectors in CE. Journal of Separation Science 2013, 36 (7), 1270–1274 DOI: 10.1002/jssc.201201144.

Tichý, M.; Pohl, R.; Tloušt’ová, E.; Weber, J.; Bahador, G.; Lee, Y. - J.; Hocek, M. Synthesis and biological activity of benzo-fused 7-deazaadenosine analogues. 5- and 6-substituted 4-amino- or 4-alkylpyrimido[4,5-b]indole ribonucleosides. Bioorganic & Medicinal Chemistry 2013, 21 (17), 5362-5372 DOI: 10.1016/j.bmc.2013.06.011.

Perlíková, P.; Eberlin, L.; Ménová, P.; Raindlová, V.; Slavětínská, L.; Tloušťová, E.; Bahador, G.; Lee, Y. - J.; Hocek, M. Synthesis and Cytostatic and Antiviral Activities of 2′-Deoxy-2′,2′-difluororibo- and 2′-Deoxy-2′-fluororibonucleosides Derived from 7-(Het)aryl-7-deazaadenines. ChemMedChem 2013, 8 (5), 832-846 DOI: 10.1002/cmdc.201300047.

Sedlák, D.; Eignerová, B.; Dračínský, M.; Janoušek, Z.; Bartůněk, P.; Kotora, M. Synthesis and evaluation of 17α-(carboranylalkyl)estradiols as ligands for estrogen receptors α and β. Journal of Organometallic Chemistry 2013, 747, 178-183 DOI: 10.1016/j.jorganchem.2013.06.013.

Korotvička, A.; Šnajdr, I.; Štěpnička, P.; Císařová, I.; Janoušek, Z.; Kotora, M. Synthesis, Molecular Structure, and Electrochemistry of 1-Ferrocenyl-1,2-dicarba- closo -dodecaboranes. European Journal of Inorganic Chemistry 2013, 2013 (15), 2789-2798 DOI: 10.1002/ejic.201300110.

Janková, Š.; Schulz, J.; Hybelbauerová, S.; Císařová, I.; Štěpnička, P.; Kotora, M. Synthesis of 1,2,3,4-Tetramethyl- and 1,2,3,4-Tetraethylfluorene through a Dewar Benzene Pathway: Synthesis of 1,2,3,4-Tetramethyl- and 1,2,3,4-Tetraethylfluorene. European Journal of Organic Chemistry 2013, 2013 (1), 44-47 DOI: 10.1002/ejoc.201201343.

Kubelka, T.; Slavětínská, L.; Eigner, V.; Hocek, M. Synthesis of 2,6-disubstituted pyridin-3-yl C-2′-deoxyribonucleosides through chemoselective transformations of bromo-chloropyridine C-nucleosides. Organic & Biomolecular Chemistry 2013, 11 (28), 4702 DOI: 10.1039/c3ob40774h.

Kalachova, L.; Pohl, R.; Bednárová, L.; Fanfrlík, J.; Hocek, M. Synthesis of nucleosides and dNTPs bearing oligopyridine ligands linked through an octadiyne tether, their incorporation into DNA and complexation with transition metal cations. Org. Biomol. Chem. 2013, 11 (1), 78-89 DOI: 10.1039/C2OB26881G.

Machara, A.; Svoboda, J. Thiophenium-ylides: Synthesis and reactivity. Chemical Papers 2013, 67 (1) DOI: 10.2478/s11696-012-0222-7.

Chong, S. Y.; Jones, J. T. A.; Khimyak, Y. Z.; Cooper, A. I.; Thomas, A.; Antonietti, M.; Bojdys, M. J. Tuning of gallery heights in a crystalline 2D carbon nitride network. J. Mater. Chem. A 2013, 1 (4), 1102-1107 DOI: 10.1039/C2TA01068B.

Dadová, J.; Orság, P.; Pohl, R.; Brázdová, M.; Fojta, M.; Hocek, M. Vinylsulfonamide and Acrylamide Modification of DNA for Cross-linking with Proteins. Angewandte Chemie International Edition 2013, 52 (40), 10515-10518 DOI: 10.1002/anie.201303577.

Machara, A.; D. Cox, P.; Hudlicky, T. ChemInform Abstract: Synthesis of Nalbuphine from Oripavine via N-Demethylation of N-Cyclobutylmethyl Oripavine. ChemInform 2012, 43 (19), no-no DOI: 10.1002/chin.201219209.

Machara, A.; D. Cox, P.; Hudlicky, T. Direct Synthesis of Naltrexone by Palladium-Catalyzed N -Demethylation/Acylation of Oxymorphone: The Benefit of CH Activation and the Intramolecular Acyl Transfer from C-14 Hydroxy. Advanced Synthesis & Catalysis 2012, 354 (14-15), 2713-2718 DOI: 10.1002/adsc.201200677.

Hartman, T.; Herzig, V.; Buděšínský, M.; Jindřich, J.; Cibulka, R.; Kraus, T. Flavin–cyclodextrin conjugates: effect of the structure on the catalytic activity in enantioselective sulfoxidations. Tetrahedron: Asymmetry 2012, 23 (22–23), 1571-1583 DOI: 10.1016/j.tetasy.2012.10.017.

Kubelka, T.; Slavětínská, L.; Hocek, M. A General Regioselective Approach to 2,4-Disubstituted Pyrimidin-5-yl C-2-Deoxyribonucleosides. Synthesis 2012, 44 (06), 953-965 DOI: 10.1055/s-0031-1289694.

Ćerňová, M.; Pohl, R.; Klepetářová, B.; Hocek, M. A General Regioselective Synthesis of 2,4-Diarylpyrimidines from 2- Thiouracil through Two Orthogonal Cross-Coupling Reactions. Synlett 2012, 23 (09), 1305-1308 DOI: 10.1055/s-0031-1290826.

Riedl, J.; Ménová, P.; Pohl, R.; Orság, P.; Fojta, M.; Hocek, M. GFP-like Fluorophores as DNA Labels for Studying DNA–Protein Interactions. The Journal of Organic Chemistry 2012, 77 (18), 8287-8293 DOI: 10.1021/jo301684b.

Remeš, M.; Vesely, J. Highly Enantioselective Organocatalytic Formation of Functionalized Cyclopentane Derivatives via Tandem Conjugate Addition/α-Alkylation of Enals. European Journal of Organic Chemistry 2012, 2012 (20), 3747-3752 DOI: 10.1002/ejoc.201200334.

Řezanka, M.; Řezanka, P.; Sýkora, D.; Jindřich, J.; Král, V. Impact of substituent position in monosubstituted α-cyclodextrins on enantioselectivity in capillary electrophoresis. Journal of Separation Science 2012, 35 (7), 811–815 DOI: 10.1002/jssc.201101034.

Machara, A.; Werner, L.; Endoma-Arias, M. Ann; D. Cox, P.; Hudlicky, T. Improved Synthesis of Buprenorphine from Thebaine and/or Oripavine via Palladium-Catalyzed N-Demethylation/Acylation and/or Concomitant O-Demethylation. Advanced Synthesis & Catalysis 2012, 354 (4), 613-626 DOI: 10.1002/adsc.201100807.

Riedl, J.; Pohl, R.; Ernsting, N. P.; Orság, P.; Fojta, M.; Hocek, M. Labelling of nucleosides and oligonucleotides by solvatochromic 4-aminophthalimide fluorophore for studying DNA–protein interactions. Chemical Science 2012, 3 (9), 2797 DOI: 10.1039/c2sc20404e.

Vesely, J.; Rios, R. Organocatalytic Enantioselective α-Alkylation of Aldehydes. ChemCatChem 2012, 4 (7), 942-953 DOI: 10.1002/cctc.201200072.

Ren, S.; Bojdys, M. J.; Dawson, R.; Laybourn, A.; Khimyak, Y. Z.; Adams, D. J.; Cooper, A. I. Porous, Fluorescent, Covalent Triazine-Based Frameworks Via Room-Temperature and Microwave-Assisted Synthesis. Advanced Materials 2012, 24 (17), 2357-2361 DOI: 10.1002/adma.201200751.