Publications

Dračínský, M.; Castaño, O.; Kotora, M.; Bouř, P. Rearrangement of Dewar Benzene Derivatives Studied by DFT. The Journal of Organic Chemistry 2010, 75 (3), 576-581 DOI: 10.1021/jo902065n.

Jindřich, J.; Pitha, J.; Lindberg, B.; Seffers, P.; Harata, K. Regioselectivity of alkylation of cyclomaltoheptaose ([beta]-cyclodextrin) and synthesis of its mono-2-O-methyl, -ethyl, -allyl, and -propyl derivatives. Carbohydrate Research 1995, 266 (1), 75-80 DOI: 10.1016/0008-6215(94)00251-A.

Bastien, G.; Císařová, I.; Dračínský, M.; Hurtado, C. Santos; Kaleta, J.; Mašát, M.; Rogers, C. T.; Rončević, I.; Štoček, J. Radek. Regular Two-Dimensional Arrays of Surface-Mounted Molecular Switches: Switching Monitored by UV-vis and NMR Spectroscopy. Journal of the American Chemical Society 2020, 142 (20), 9337-9351 DOI: 10.1021/jacs.0c01753.

Abdelsayed, M. M.; A. Chamberlin, R.; Chizzolini, F.; Kasireddy, S. Reddy; Luptak, A.; Míšek, J.; Passalacqua, L. F. M.; Rotstan, K. A. Regulation of mRNA translation by a photoriboswitch. eLife 2020, 9 (February 2020), nestránkováno DOI: 10.7554/eLife.51737.

Albiñana, C. Berenguer; Hayward, J. J.; Hudlicky, T.; Machara, A. Reinvestigation of acetylation of 3,4-dihydroxybenzaldehyde and reconciliation of previously reported analytical data. Tetrahedron Letters 2016, 57 (9), 1019-1021 DOI: 10.1016/j.tetlet.2016.01.075.

Novák, P.; Kotora, M. Rh- and Ru-complex-catalyzed dimerization of arylethynes in aqueous environment. Collection of Czechoslovak Chemical Communications 2009, 74 (3), 433-442 DOI: 10.1135/cccc2008172.

Nečas, D.; Kotora, M. Rhodium-Catalyzed C-C Bond Cleavage Reactions. Current Organic Chemistry 2007, 11 (17), 1566-1591 DOI: 10.2174/138527207782418645.

Korotvička, A.; Nečas, D.; Kotora, M. Rhodium-catalyzed C-C Bond Cleavage Reactions - An Update. Current Organic Chemistry 2012, 16 (10), 1170-1214 DOI: 10.2174/138527212800564213.

Nečas, D.; Kotora, M. Ring Opening of Methylenecycloalkenes via the C−C Bond Cleavage. Organic Letters 2008, 10 (22), 5261-5263 DOI: 10.1021/ol801728f.

Schulz, J.; Jašíková, L.; Škríba, A.; Roithová, J. Role of Gold(I) α-Oxo Carbenes in the Oxidation Reactions of Alkynes Catalyzed by Gold(I) Complexes. Journal of the American Chemical Society 2014, 136 (32), 11513-11523 DOI: 10.1021/ja505945d.

Váňa, J.; Lang, J.; Soltesova, M.; Hanusek, J.; Růžička, A.; Sedlák, M.; Roithová, J. The role of trinuclear species in a palladium acetate/trifluoroacetic acid catalytic system. Dalton Transactions 2017, 46 (46), 16269-16275 DOI: 10.1039/c7dt03832a.

Dziuba, D.; Jurkiewicz, P.; Cebecauer, M.; Hof, M.; Hocek, M. A Rotational BODIPY Nucleotide: An Environment-Sensitive Fluorescence-Lifetime Probe for DNA Interactions and Applications in Live-Cell Microscopy. Angewandte Chemie International Edition 2016, 55 (1), 174-178 DOI: 10.1002/anie.201507922.

Bednářová, E.; Colacino, E.; Lamaty, F.; Kotora, M. A Ruthenium Complex-Catalyzed Cyclotrimerization of Halodiynes with Nitriles. Synthesis of 2- and 3-Halopyridines. Advanced Synthesis & Catalysis 2016, 358 (12), 1916-1923 DOI: 10.1002/adsc.201600127.

Araki, Y.; Topolovčan, N.; Kotora, M. Ruthenium-Catalyzed Cross-Metathesis of Allyl Acetate and Styrenes: A Practical Approach to the Synthesis of Tripolinolate A and Its Analogs. European Journal of Organic Chemistry 2017, No. 13, 1736-1739 DOI: 10.1002/ejoc.201700132.

Ménová, P.; Raindlová, V.; Hocek, M. Scope and Limitations of the Nicking Enzyme Amplification Reaction for the Synthesis of Base-Modified Oligonucleotides and Primers for PCR. Bioconjugate Chemistry 2013, 24 (6), 1081-1093 DOI: 10.1021/bc400149q.

Bursová, M.; Čabala, R.; Hložek, T.; Jelinek, I.; Štícha, M.; Tůma, P. Sensitive CE-MS method for monitoring of riociguat and desmethylriociguat levels in human serum. Electrophoresis 2020, 41 (18-19), 1564-1567 DOI: 10.1002/elps.202000135.

Jindrich, J.; Pitha, J.; Lindberg, B. Separation of cyclodextrins and their derivatives by thin-layer and preparative column chromatography. Carbohydrate Research 1995, 275 (1), 1-7.

Werner, L.; Machara, A.; Sullivan, B.; Carrera, I.; Moser, M.; Adams, D. R.; Hudlicky, T.; Andraos, J. Several Generations of Chemoenzymatic Synthesis of Oseltamivir (Tamiflu): Evolution of Strategy, Quest for a Process-Quality Synthesis, and Evaluation of Efficiency Metrics. The Journal of Organic Chemistry 2011, 76 (24), 10050-10067 DOI: 10.1021/jo2018872.

Werner, L.; Machara, A.; Hudlicky, T. Short Chemoenzymatic Azide-Free Synthesis of Oseltamivir (Tamiflu): Approaching the Potential for Process Efficiency. Advanced Synthesis & Catalysis 2010, 352 (1), 195-200 DOI: 10.1002/adsc.200900844.

Kadlcikova, A.; Hrdina, R.; Valterová, I.; Kotora, M. Simple and Fast Synthesis of New Axially Chiral Bipyridine N,N′ -Dioxides for Highly Enantioselective Allylation of Aldehydes. Advanced Synthesis & Catalysis 2009, 351 (9), 1279-1283 DOI: 10.1002/adsc.200900224.

Hrdina, R.; Valterová, I.; Hodačová, J.; Císařová, I.; Kotora, M. A Simple Approach to Unsymmetric Atropoisomeric BipyridineN,N′-Dioxides and Their Application in Enantioselective Allylation of Aldehydes. Advanced Synthesis & Catalysis 2007, 349 (6), 822-826 DOI: 10.1002/adsc.200600400.

Jindřich, J.; Tislerova, I. Simple Preparation of 3(I)-O-Substituted β-Cyclodextrin Derivatives Using Cinnamyl Bromide. The Journal of Organic Chemistry 2005, 70 (22), 9054-9055 DOI: 10.1021/jo051339c.

Hocek, M.; Jauset-Rubio, M.; Kodr, D.; Ortiz, M.; O'Sullivan, C. Kathleen; Simonova, A. Solid-phase recombinase polymerase amplification using ferrocene-labelled dNTPs for electrochemical detection of single nucleotide polymorphisms. Biosensors and Bioelectronics 2022, 198 (February), nestránkováno.

Dziuba, D.; Pospíšil, P.; Matyašovský, J.; Brynda, J.; Nachtigallová, D.; Rulíšek, L.; Pohl, R.; Hof, M.; Hocek, M. Solvatochromic fluorene-linked nucleoside and DNA as color-changing fluorescent probes for sensing interactions. Chem. Sci. 2016, 7 (9), 5775-5785 DOI: 10.1039/C6SC02548J.

Bobula, T.; Hocek, M.; Kotora, M. Sonogashira reactions of α- and β-1-ethynyl-2-deoxyribosides: synthesis of acetylene-extended C-nucleosides. Tetrahedron 2010, 66 (2), 530-536 DOI: 10.1016/j.tet.2009.11.030.