Publications

Kolská, K.; Ghavre, M.; Pour, M.; Hybelbauerová, S.; Kotora, M. Total Synthesis of Coibacin D by Using Enantioselective Allylation and Metathesis Reactions. Asian Journal of Organic Chemistry 2016, 5 (5), 646-651 DOI: 10.1002/ajoc.201600022.

Auvinet, A. - L.; Eignerová, B.; Guy, A.; Kotora, M.; Durand, T. Total synthesis of 4-F3t-neuroprostane and its 4-epimer. Tetrahedron Letters 2009, 50 (13), 1498-1500 DOI: 10.1016/j.tetlet.2009.01.075.

Dian, J.; Holec, T.; Jelinek, I.; Jindrich, J.; Valenta, J.; Pelant, I. Time evolution of photoluminescence response from porous silicon in hydrocarbon gas sensing. Physica Status Solidi A-Applied Research 2000, 182 (1), 485-488 DOI: 10.1002/1521-396X(200011)182:1<485::AID-PSSA485>3.0.CO;2-8.

Machara, A.; Svoboda, J. Thiophenium-ylides: Synthesis and reactivity. Chemical Papers 2013, 67 (1) DOI: 10.2478/s11696-012-0222-7.

Gallardo, P. Güixens; Hocek, M.; Hof, M.; Humpolickova, J.; Jurkiewicz, P.; Kraus, T.; Miclea, S. Paul; Pohl, R. Thiophene-linked tetramethylbodipy-labeled nucleotide for viscosity-sensitive oligonucleotide probes of hybridization and protein-DNA interactions. Organic and Biomolecular Chemistry 2020, 18 (5), 912-919 DOI: 10.1039/c9ob02634g.

Brábek, J.; Černochová, Z.; Groborz, O.; Hrubý, M.; Kolouchová, K.; Rösel, D.; Starčuk, Z.; Škarková, A.; Šlouf, M.; Švec, P. Thermo- and ROS-Responsive Self-Assembled Polymer Nanoparticle Tracers for F-19 MRI Theranostics. Biomacromolecules 2021, 22 (6), 2325-2337.

Matoušová, E.; Růžička, A.; Kuneš, J.; Králová, J.; Pour, M. TFP as a ligand in Au(i)-catalyzed dihydropyran synthesis. Unprecedented rearrangement of dihydropyrans into cyclopentenones. Chemical Communications 2011, 47 (33), 9390 DOI: 10.1039/c1cc13525b.

Schwarz, D.; Kochergin, Y. S.; Acharjya, A.; Ichangi, A.; Opanasenko, M. V.; Cejka, J.; Lappan, U.; Arki, P.; He, J.; Schmidt, J.; et al. Tailored Band Gaps in Sulfur- and Nitrogen-Containing Porous Donor-Acceptor Polymers. Chemistry-a European Journal 2017, 23 (53), 13023-13027 DOI: 10.1002/chem.201703332.

Gerlich, D.; Jašík, J.; Roithová, J. Tagging fullerene ions with helium in a cryogenic quadrupole trap. International Journal of Mass Spectrometry 2019, 438, 78-86 DOI: 10.1016/j.ijms.2018.12.018.

Dhami, K.; Malyshev, D. A.; Ordoukhanian, P.; Kubelka, T.; Hocek, M.; Romesberg, F. E. Systematic exploration of a class of hydrophobic unnatural base pairs yields multiple new candidates for the expansion of the genetic alphabet. Nucleic Acids Research 2014, 42 (16), 10235-10244 DOI: 10.1093/nar/gku715.

Bakhanovich, O.; Beier, P. Synthesis, Stability and Reactivity of alpha-Fluorinated Azidoalkanes. Chemistry - A European Journal 2020, 26 (4), 773-782 DOI: 10.1002/chem.201903627.

Džubák, P.; Gurska, S.; Hajdúch, M.; Hocek, M.; Pavliš, P.; Pohl, R.; Tichý, M.; Yang, C. Synthesis, Photophysical Properties, and Biological Profiling of Benzothieno-Fused 7-Deazapurine Ribonucleosides. Journal of Organic Chemistry 2020, 85 (12), 8085-8101 DOI: 10.1021/acs.joc.0c00927.

Korotvička, A.; Hybelbauerová, S.; Kotora, M. Synthesis of trans-Fused Sesquiterpenoid Analogues by Zirconocene-Mediated Metallo-ene Reaction. Synlett 2009, 2009 (15), 2445-2448 DOI: 10.1055/s-0029-1217738.

Janková, Š.; Hybelbauerová, S.; Kotora, M. Synthesis of Substituted Linear Ter- and Quaterphenyls via Dewar Benzenes. Synlett 2011, 2011 (03), 396-398 DOI: 10.1055/s-0030-1259321.

Kubelka, T.; Slavětínská, L.; Hocek, M. Synthesis of Substituted Benzyl Homo-C-Ribonucleosides and -Nucleotides as Carba Analogues of Phosphoribosylanthranilate. European Journal of Organic Chemistry 2012, 2012 (26), 4969-4981 DOI: 10.1002/ejoc.201200819.

Kaiser, R. P.; Mosinger, J.; Císařová, I.; Kotora, M. Synthesis of selectively 4-substituted 9,9 '-spirobifluorenes and modulation of their photophysical properties. Organic & Biomolecular Chemistry 2017, 15 (33), 6913-6920 DOI: 10.1039/c7ob01319a.

Korotvička, A.; Frejka, D.; Hampejsová, Z.; Císařová, I.; Kotora, M. Synthesis of Phenanthridines via a Rhodium-Catalyzed C–C Bond Cleavage Reaction of Biphenylene with Nitriles. Synthesis 2016, 48 (07), 987-996 DOI: 10.1055/s-0035-1561343.

Eignerová, B.; Janoušek, Z.; Dračínský, M.; Kotora, M. Synthesis of Perfluoroalkylated Carboranes by Cross-Metathesis of Allylcarboranes and Perfluoroalkylpropenes. Synlett 2010, 2010 (06), 885-888 DOI: 10.1055/s-0029-1219546.

A. Downey, M.; Pohl, R.; Roithová, J.; Hocek, M. Synthesis of Nucleosides through Direct Glycosylation of Nucleobases with 5-O-Monoprotected or 5-Modified Ribose: Improved Protocol, Scope, and Mechanism. Chemistry-a European Journal 2017, 23 (16), 3910-3917 DOI: 10.1002/chem.201604955.

Kalachova, L.; Pohl, R.; Bednárová, L.; Fanfrlík, J.; Hocek, M. Synthesis of nucleosides and dNTPs bearing oligopyridine ligands linked through an octadiyne tether, their incorporation into DNA and complexation with transition metal cations. Org. Biomol. Chem. 2013, 11 (1), 78-89 DOI: 10.1039/C2OB26881G.

Bakhanovich, O.; Beier, P.; Khutorianskyi, V.; Motornov, V. Synthesis of N-perfluoroalkyl-3,4-disubstituted pyrroles by rhodium-catalyzed transannulation of N-fluoroalkyl-1,2,3-triazoles with terminal alkynes. Beilstein Journal of Organic Chemistry 2021, 17 (February 18 2021), 504-510.

Machara, A.; Endoma-Arias, M.; Císařová, I.; Cox, D.; Hudlicky, T. Synthesis of Nororipavine and Noroxymorphone via N- and O-Demethylation of Iron Tricarbonyl Complex of Thebaine. Synthesis 2016, 48 (12), e1-e1 DOI: 10.1055/s-0035-1562345.

Jindrich, J.; Holy, A.; Dvorakova, H. Synthesis of N-(3-Fluoro-2-phophonomethoxypropyl) (FPMP) Derivatives of Heterocyclic Bases. Collection of Czechoslovak Chemical Communications 1993, 58 (7), 1645-1667.

Řezanka, M.; Eignerová, B.; Jindřich, J.; Kotora, M. Synthesis of Mono(perfluoroalkyl) Cyclodextrins via Cross Metathesis. European Journal of Organic Chemistry 2010, 2010 (32), 6256-6262 DOI: 10.1002/ejoc.201000807.

Jindrich, J.; Dvorakova, H.; Holy, A. Synthesis of Isomeric N-(3-Fluoro-2-hydroxypropyl) and N-(2-Fluoro-3-hydroxypropyl) Derivatives of Purine and Pyrimidine-bases. Collection of Czechoslovak Chemical Communications 1992, 57 (7), 1466-1482.