Publications

Dziuba, D.; Pospíšil, P.; Matyašovský, J.; Brynda, J.; Nachtigallová, D.; Rulíšek, L.; Pohl, R.; Hof, M.; Hocek, M. Solvatochromic fluorene-linked nucleoside and DNA as color-changing fluorescent probes for sensing interactions. Chem. Sci. 2016, 7 (9), 5775-5785 DOI: 10.1039/C6SC02548J.

Džubák, P.; Gurska, S.; Hajdúch, M.; Hocek, M.; Pavliš, P.; Pohl, R.; Tichý, M.; Yang, C. Synthesis, Photophysical Properties, and Biological Profiling of Benzothieno-Fused 7-Deazapurine Ribonucleosides. Journal of Organic Chemistry 2020, 85 (12), 8085-8101 DOI: 10.1021/acs.joc.0c00927.

Eignerová, B.; Janoušek, Z.; Dračínský, M.; Kotora, M. Synthesis of Perfluoroalkylated Carboranes by Cross-Metathesis of Allylcarboranes and Perfluoroalkylpropenes. Synlett 2010, 2010 (06), 885-888 DOI: 10.1055/s-0029-1219546.

Eignerová, B.; Sedlák, D.; Dračínský, M.; Bartůněk, P.; Kotora, M. Synthesis and Biochemical Characterization of a Series of 17α-Perfluoroalkylated Estradiols as Selective Ligands for Estrogen Receptor α. Journal of Medicinal Chemistry 2010, 53 (19), 6947-6953 DOI: 10.1021/jm100563h.

Eignerová, B.; Slavíková, B.; Buděšínský, M.; Dračínský, M.; Klepetářová, B.; Št’astná, E.; Kotora, M. Synthesis of Fluorinated Brassinosteroids Based on Alkene Cross-Metathesis and Preliminary Biological Assessment. Journal of Medicinal Chemistry 2009, 52 (18), 5753-5757 DOI: 10.1021/jm900495f.

Hejdánek, J.; Hodek, J.; Konvalinka, J.; Kožíšek, M.; Machara, A.; Pachl, P.; Radilová, K.; Řezáčová, P.; Weber, J. Structural characterization of the interaction between the C-terminal domain of the influenza polymerase PA subunit and an optimized small peptide inhibitor. Antiviral Research 2021, 185 (January), nestránkováno.

Hessler, F.; Korotvička, A.; Nečas, D.; Valterová, I.; Kotora, M. Syntheses of a Flobufen Metabolite and Dapoxetine Based on Enantioselective Allylation of Aromatic Aldehydes: Syntheses of a Flobufen Metabolite and Dapoxetine. European Journal of Organic Chemistry 2014, 2014 (12), 2543-2548 DOI: 10.1002/ejoc.201301899.

Hessler, F.; Císařová, I.; Sedlák, D.; Bartůněk, P.; Kotora, M. Synthesis of Ferrocenestrone: the First Metallocene Based Steroid Analogue. Chemistry - A European Journal 2012, 18 (18), 5515-5518 DOI: 10.1002/chem.201200687.

Hocek, M.; Jauset-Rubio, M.; Kodr, D.; Ortiz, M.; O'Sullivan, C. Kathleen; Simonova, A. Solid-phase recombinase polymerase amplification using ferrocene-labelled dNTPs for electrochemical detection of single nucleotide polymorphisms. Biosensors and Bioelectronics 2022, 198 (February), nestránkováno.

Hocek, M. Synthesis of Base-Modified 2′-Deoxyribonucleoside Triphosphates and Their Use in Enzymatic Synthesis of Modified DNA for Applications in Bioanalysis and Chemical Biology. The Journal of Organic Chemistry 2014, 79 (21), 9914-9921 DOI: 10.1021/jo5020799.

Hrdina, R.; Valterová, I.; Hodačová, J.; Císařová, I.; Kotora, M. A Simple Approach to Unsymmetric Atropoisomeric BipyridineN,N′-Dioxides and Their Application in Enantioselective Allylation of Aldehydes. Advanced Synthesis & Catalysis 2007, 349 (6), 822-826 DOI: 10.1002/adsc.200600400.

Humpl, M.; Tauchman, J.; Topolovčan, N.; Kretschmer, J.; Hessler, F.; Císařová, I.; Kotora, M.; Vesely, J. Stereoselective Synthesis of Ezetimibe via Cross-Metathesis of Homoallylalcohols and α-Methylidene-β-Lactams. The Journal of Organic Chemistry 2016, 81 (17), 7692-7699 DOI: 10.1021/acs.joc.6b01406.

Ivancova, I.; Pohl, R.; Hubalek, M.; Hocek, M. Squaramate-Modified Nucleotides and DNA for Specific Cross-Linking with Lysine-Containing Peptides and Proteins. Angewandte Chemie-International Edition 2019, 58 (38), 13345-13348 DOI: 10.1002/anie.201906737.

Janková, Š.; Dračínský, M.; Císařová, I.; Kotora, M. Synthesis and Rearrangement of Dewar Benzenes Into Biaryls: Experimental Evidence for Conrotatory Ring Opening. European Journal of Organic Chemistry 2008, 2008 (1), 47-51 DOI: 10.1002/ejoc.200700916.

Janková, Š.; Císařová, I.; Uhlík, F.; Štěpnička, P.; Kotora, M. Synthesis and characterisation of Dewar benzene–ferrocene conjugates. Dalton Transactions 2009, No. 17, 3137 DOI: 10.1039/b904488b.

Janková, Š.; Hybelbauerová, S.; Kotora, M. Synthesis of Substituted Linear Ter- and Quaterphenyls via Dewar Benzenes. Synlett 2011, 2011 (03), 396-398 DOI: 10.1055/s-0030-1259321.

Janková, Š.; Schulz, J.; Hybelbauerová, S.; Císařová, I.; Štěpnička, P.; Kotora, M. Synthesis of 1,2,3,4-Tetramethyl- and 1,2,3,4-Tetraethylfluorene through a Dewar Benzene Pathway: Synthesis of 1,2,3,4-Tetramethyl- and 1,2,3,4-Tetraethylfluorene. European Journal of Organic Chemistry 2013, 2013 (1), 44-47 DOI: 10.1002/ejoc.201201343.

Jindrich, J.; Holy, A.; Dvorakova, H. Synthesis of N-(3-Fluoro-2-phophonomethoxypropyl) (FPMP) Derivatives of Heterocyclic Bases. Collection of Czechoslovak Chemical Communications 1993, 58 (7), 1645-1667.

Jindrich, J.; Harata, K.; Lindberg, B.; Pitha, J.; Seffers, P. Synthesis of 2(1),3(1)-O-(propane-1,2-diyl)- and 2(1),3(1)-O-(3-hydroxypropane-1,2-diyl)cyclomaltoheptaose. Carbohydrate Research 1997, 300 (4), 361-363.

Jindrich, J.; Cerny, M.; Trnka, T.; Budesinsky, M. Synhteses with Anhydro Sugars .39. The Synthesis of 4-O-Oligoethylene Glycol Derivatives of 1,6-Anhydro-beta-D-glycopyranos and Crown-ethers Formed by Their Intramolecular Cyclization. Collection of Czechoslovak Chemical Communications 1991, 56 (12), 2950-2963.

Jindřich, J.; Tislerova, I. Simple Preparation of 3(I)-O-Substituted β-Cyclodextrin Derivatives Using Cinnamyl Bromide. The Journal of Organic Chemistry 2005, 70 (22), 9054-9055 DOI: 10.1021/jo051339c.

Jindrich, J.; Dvorakova, H.; Holy, A. Synthesis of Isomeric N-(3-Fluoro-2-hydroxypropyl) and N-(2-Fluoro-3-hydroxypropyl) Derivatives of Purine and Pyrimidine-bases. Collection of Czechoslovak Chemical Communications 1992, 57 (7), 1466-1482.

Jindrich, J.; Pitha, J.; Lindberg, B. Separation of cyclodextrins and their derivatives by thin-layer and preparative column chromatography. Carbohydrate Research 1995, 275 (1), 1-7.

Kadlcikova, A.; Hrdina, R.; Valterová, I.; Kotora, M. Simple and Fast Synthesis of New Axially Chiral Bipyridine N,N′ -Dioxides for Highly Enantioselective Allylation of Aldehydes. Advanced Synthesis & Catalysis 2009, 351 (9), 1279-1283 DOI: 10.1002/adsc.200900224.

Kaiser, R. P.; Mosinger, J.; Císařová, I.; Kotora, M. Synthesis of selectively 4-substituted 9,9 '-spirobifluorenes and modulation of their photophysical properties. Organic & Biomolecular Chemistry 2017, 15 (33), 6913-6920 DOI: 10.1039/c7ob01319a.