Publications

Baszczyňski, O.; Cigáň, M.; Filo, J.; Májek, M.; Procházková, E.; Straka, M.; Šimon, P. Phosphate linkers with traceable cyclic intermediates for self-immolation detection and monitoring. Chemical Communications 2021, 57 (2), 211-214.

Baszczyňski, O.; Gallardo, M. García; Procházková, E.; Šimon, P.; Tichotová, M. Phosphate-Based Self-Immolative Linkers for Tuneable Double Cargo Release. Chemistry - A European Journal 2021, 27 (50), 12763-12775.

Baszczyňski, O.; Černý, J.; Čmoková, A.; Grobárová, V.; Kolařík, M.; Procházková, E.; Slapničková, M.; Štěpánek, O.; Zíková, A. Piperazine-Modified Ketoconazole Derivatives Show Increased Activity against Fungal and Trypanosomatid Pathogens. ChemMedChem 2022, 17 (21), nestránkováno.

Beier, P.; Klimánková, I.; Košťál, V.; Motornov, V.; Tichy, D. Preparation of 1-Azido-2-Bromo-1,1,2,2-Tetrafluoroethane and Its Use in the Synthesis of N-Fluoroalkylated Nitrogen Heterocycles. Journal of Organic Chemistry 2020, 85 (17), 11482-11489 DOI: 10.1021/acs.joc.0c01610.

Bojdys, M. J.; Hasell, T.; Severin, N.; Jelfs, K. E.; Rabe, J. P.; Cooper, A. I. Porous organic cage crystals: characterising the porous crystal surface. Chemical Communications 2012, 48 (98), 11948 DOI: 10.1039/c2cc36602a.

Císařová, I.; David, T.; Dračínský, M.; Jirák, D.; Jurok, R.; Kretschmer, J.; Kuchař, M.; Polášek, M.; Socha, O.; Vít, M. Paramagnetic encoding of molecules. Nature Communications [online] 2022, 13 (1), nestránkováno.

Dziuba, D.; Pohl, R.; Hocek, M. Polymerase synthesis of DNA labelled with benzylidene cyanoacetamide-based fluorescent molecular rotors: fluorescent light-up probes for DNA-binding proteins. Chem. Commun. 2015, 51 (23), 4880-4882 DOI: 10.1039/C5CC00530B.

Džubák, P.; Gurska, S.; Hajdúch, M.; Hocek, M.; Pohl, R.; Tloušťová, E.; Veselovská, L. Pyrido-Fused Deazapurine Bases: Synthesis and Glycosylation of 4-Substituted 9H-Pyrido[2',3':4,5]- and Pyrido[4',3':4,5]pyrrolo[2,3-d]pyrimidines. ACS Omega [online] 2020, 5 (40), 26278-26286 DOI: 10.1021/acsomega.0c04302.

Eignerová, B.; Dračínský, M.; Kotora, M. Perfluoroalkylation through Cross-Metathesis between Alkenes and (Perfluoroalkyl)propenes. European Journal of Organic Chemistry 2008, 2008 (26), 4493-4499 DOI: 10.1002/ejoc.200800230.

Hausnerova, V. Vankova; Hocek, M.; Chakrapani, A.; Krásný, L.; Pohl, R.; Ruiz-Larrabeiti, O. Photocaged 5-(Hydroxymethyl)pyrimidine Nucleoside Phosphoramidites for Specific Photoactivatable Epigenetic Labeling of DNA. Organic Letters 2020, 22 (22), 9081-9085 DOI: 10.1021/acs.orglett.0c03462.

Jašík, J.; Gerlich, D.; Roithová, J. Probing Isomers of the Benzene Dication in a Low-Temperature Trap. Journal of the American Chemical Society 2014, 136 (8), 2960-2962 DOI: 10.1021/ja412109h.

Machara, A.; Kozmík, V.; Pojarová, M.; Dvořáková, H.; Svoboda, J. Preparation and rearrangement study of novel thiophenium- and selenophenium-ylides. Collection of Czechoslovak Chemical Communications 2009, 1 DOI: 10.1135/cccc2009001.

Mačková, M.; Pohl, R.; Hocek, M. Polymerase Synthesis of DNAs Bearing Vinyl Groups in the Major Groove and their Cleavage by Restriction Endonucleases. ChemBioChem 2014, 15 (15), 2306-2312 DOI: 10.1002/cbic.201402319.

Mačková, M.; Boháčová, S.; Perlíková, P.; Slavětínská, L. Poštová; Hocek, M. Polymerase Synthesis and Restriction Enzyme Cleavage of DNA Containing 7-Substituted 7-Deazaguanine Nucleobases. ChemBioChem 2015, 16 (15), 2225-2236 DOI: 10.1002/cbic.201500315.

Ménová, P.; Hocek, M. Preparation of short cytosine-modified oligonucleotides by nicking enzyme amplification reaction. Chemical Communications 2012, 48 (55), 6921 DOI: 10.1039/c2cc32930a.

Ménová, P.; Cahová, H.; Plucnara, M.; Havran, L.; Fojta, M.; Hocek, M. Polymerase synthesis of oligonucleotides containing a single chemically modified nucleobase for site-specific redox labelling. Chemical Communications 2013, 49 (41), 4652 DOI: 10.1039/c3cc41438h.

Merta, A.; Votruba, I.; Jindrich, J.; Holy, A.; Cihlar, T.; Rosenberg, I.; Otmar, M.; Herve, T. Y. Phosphorylation of 9-(2-phosphonomethoxyethyl)adenine and 9-(S)-(3-hydroxy-2-phosphonomethoxypropyl)adenine by AMP (dAMP) kinase from L1210 cells. Biochemical Pharmacology 1992, 44 (10), 2067-2077 DOI: 10.1016/0006-2952(92)90110-5.

Nakanishi, T.; Weber, J.; Bojdys, M. J.; Thomas, A. Polymeric Frameworks: Toward Porous Semiconductors; John Wiley & Sons, Inc.: Hoboken, NJ, USA, 2011; pp 119-154.

Nakatani, K.; Tor, Y.; Dadová, J.; Cahová, H.; Hocek, M. Polymerase Synthesis of Base-Modified DNA; Springer International Publishing: Cham, 2016; Vol. 31, pp 123-144.

Popr, M.; Filippov, S. K.; Matushkin, N.; Dian, J.; Jindřich, J. Properties of cationic monosubstituted tetraalkylammonium cyclodextrin derivatives – their stability, complexation ability in solution or when deposited on solid anionic surface. Beilstein Journal of Organic Chemistry 2015, 11, 192-199 DOI: 10.3762/bjoc.11.20.

Ren, S.; Bojdys, M. J.; Dawson, R.; Laybourn, A.; Khimyak, Y. Z.; Adams, D. J.; Cooper, A. I. Porous, Fluorescent, Covalent Triazine-Based Frameworks Via Room-Temperature and Microwave-Assisted Synthesis. Advanced Materials 2012, 24 (17), 2357-2361 DOI: 10.1002/adma.201200751.

Trojan, T.; Jindrich, J.; Vrkoslav, V.; Jelinek, I.; Dian, J. Permethylated 6(I)-alkenoylamino-6(I)-deoxy beta-cyclodextrin derivatives as modifiers of photoluminescence sensor response of porous silicon. Journal of Inclusion Phenomena and Macrocyclic Chemistry 2007, 57 (1-4), 343-348 DOI: 10.1007/s10847-006-9260-5.

Váňa, J.; Roithová, J.; Kotora, M.; Beran, P.; Rulíšek, L.; Kočovský, P. Proton Affinities of Organocatalysts Derived from Pyridine N-oxide. Croatica Chemica Acta 2014, 87 (4), 349-356 DOI: 10.5562/cca2447.

Vaníková, Z.; Hocek, M. Polymerase Synthesis of Photocaged DNA Resistant against Cleavage by Restriction Endonucleases. Angewandte Chemie International Edition 2014, 53 (26), 6734-6737 DOI: 10.1002/anie.201402370.

Vrkoslav, V.; Jelinek, I.; Trojan, T.; Jindrich, J.; Dian, J. Porous silicon with beta-cyclodextrin modified surface for photoluminescence sensing of organic molecules in gas and liquid phase. Physica E: Low-dimensional Systems & Nanostructures 2007, 38 (1-2), 200-204 DOI: 10.1016/j.physe.2006.12.052.